| Protein ZmEREB100 | |
|---|---|
|
ZmEREB100 is a protein in the AP2/ERF-ERF family.
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| Information | |
| TF Name: | ZmEREB100 |
| Species: | Maize |
| TF Family: | AP2/ERF-ERF |
| Gene Name(Synonym): | EREB100 |
| Uniprot ID: | K7UPE2 |
Protein ZmEREB100
ZmEREB100 is a protein in the AP2/ERF-ERF family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00847 | |
| Zm00001eb290290_T001 |  |
| Zm00001eb290290_T001 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d038446 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038446 | DAPseq |  |
sequence | fimo | position |
| Zm00001d038446 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d038446 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmEREB100 is the regulator
Interactions where ZmEREB100 is the target
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Zm00001eb290290_T001 from maize genome v5
Amino Acid Sequence
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MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00847 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CGGTCGGTCGACGATTCCACGGTCC...
CGGTCGGTCGACGATTCCACGGTCCTCCCGCTGGAAGGAGGAGCCATGGGAGTGGGACTGAACAGGCAGGAAATGGGGCGGGCGGCGGCGACGGCGGCGGCTCCAACGGCGAGCGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGAAATGGGTATCTGAGCGAGGCAGGGTGAGATGGCAACTTGGCTGACTTCAGTAGCGTTGTTGTTCTGATGGTT
AC209257.4_FGT004 from maize genome v3
Amino Acid Sequence
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MEVPRKAMASSLVVWLLLVHSCRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPLCECL
RPQCAAPGPSSHSELG
Nucleotide Sequence
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ATGGAAGTGCCGAGGAAGGCGATGG...
ATGGAAGTGCCGAGGAAGGCGATGGCTTCCAGTCTCGTCGTATGGCTACTACTCGTGCACTCATGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATAG
AC209257.4_FGT004 from maize genome v3
Amino Acid Sequence
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MEVPRKAMASSLVVWLLLVHSCRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPLCECL
RPQCAAPGPSSHSELG
Nucleotide Sequence
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ATGGAAGTGCCGAGGAAGGCGATGG...
ATGGAAGTGCCGAGGAAGGCGATGGCTTCCAGTCTCGTCGTATGGCTACTACTCGTGCACTCATGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATAG
AC209257.4_FGT006 from maize genome v3
Amino Acid Sequence
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MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
Nucleotide Sequence
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ATGGGAGTGGGACTGAACAGGCAGG...
ATGGGAGTGGGACTGAACAGGCAGGAAATGGGGCGGGCGGCGGCGACGGCGGCGGCTCCAACGGCGAGCGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGA
AC209257.4_FGT006 from maize genome v3
Amino Acid Sequence
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MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
Nucleotide Sequence
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ATGGGAGTGGGACTGAACAGGCAGG...
ATGGGAGTGGGACTGAACAGGCAGGAAATGGGGCGGGCGGCGGCGACGGCGGCGGCTCCAACGGCGAGCGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGA
Zm00001d038446_T001 from maize genome v4
Amino Acid Sequence
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MEVPRKAMASSLVVWLLLVHSCRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPLCECL
RPQCAAPGPSSHSELGYAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREPNRGKRH
WLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPHDIAMYI
DFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
Nucleotide Sequence
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ATGGAAGTGCCGAGGAAGGCGATGG...
ATGGAAGTGCCGAGGAAGGCGATGGCTTCCAGTCTCGTCGTATGGCTACTACTCGTGCACTCATGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATACGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGA
Zm00001d038446_T001 from maize genome v4
Amino Acid Sequence
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MEVPRKAMASSLVVWLLLVHSCRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPLCECL
RPQCAAPGPSSHSELGYAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREPNRGKRH
WLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPHDIAMYI
DFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
Nucleotide Sequence
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ATGGAAGTGCCGAGGAAGGCGATGG...
ATGGAAGTGCCGAGGAAGGCGATGGCTTCCAGTCTCGTCGTATGGCTACTACTCGTGCACTCATGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATACGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGA
Zm00001eb290280_T001 from maize genome v5
Amino Acid Sequence
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MYICSCDFLLLVKLLQAHALLVHVAGRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPL
CECLRPQCAAPGPSSHSELG
Nucleotide Sequence
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ATGTATATCTGTTCGTGCGACTTCC...
ATGTATATCTGTTCGTGCGACTTCCTCCTCCTGGTCAAGCTACTGCAGGCTCACGCATTGTTGGTGCACGTCGCAGGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATAG
Zm00001eb290280_T001 from maize genome v5
Amino Acid Sequence
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MYICSCDFLLLVKLLQAHALLVHVAGRLQVPCALGADDCWVLDRDRYRFCFRTAKCRAACAEDRFVDGRCKHGFPYLLPL
CECLRPQCAAPGPSSHSELG
Nucleotide Sequence
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ATGTATATCTGTTCGTGCGACTTCC...
ATGTATATCTGTTCGTGCGACTTCCTCCTCCTGGTCAAGCTACTGCAGGCTCACGCATTGTTGGTGCACGTCGCAGGCCGCCTGCAGGTGCCGTGCGCGCTCGGAGCCGACGACTGCTGGGTCCTGGACCGCGACCGCTACCGCTTCTGCTTCAGGACGGCCAAGTGCAGGGCGGCGTGCGCGGAGGACCGCTTCGTCGACGGGCGCTGCAAGCACGGGTTCCCCTACCTGCTGCCCCTCTGCGAGTGTCTGCGCCCGCAGTGCGCAGCGCCCGGACCGAGCAGCCATTCGGAACTCGGATAG
Zm00001eb290290_T001 from maize genome v5
Amino Acid Sequence
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MGVGLNRQEMGRAAATAAAPTASAAGRQQALASRSATAKPFAERSRPAQRGMGGPDNTRHNYRGVRQRRWGKWVAEIREP
NRGKRHWLGTFDNPVDAAVAYDRAAVSIHGAHAHLNFPCSAATTADASLEHEAKPMVAAAALGGGGAEAVSQRQEDDDPH
DIAMYIDFDAVFDMVPFCHGIKREDCQHEGFDGDAVHSPLWALGD
Nucleotide Sequence
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CGGTCGGTCGACGATTCCACGGTCC...
CGGTCGGTCGACGATTCCACGGTCCTCCCGCTGGAAGGAGGAGCCATGGGAGTGGGACTGAACAGGCAGGAAATGGGGCGGGCGGCGGCGACGGCGGCGGCTCCAACGGCGAGCGCAGCAGGAAGGCAGCAAGCCCTGGCCAGCAGGAGTGCCACTGCCAAGCCGTTCGCCGAAAGGTCTCGGCCGGCGCAGCGAGGGATGGGTGGCCCAGACAACACGCGCCACAACTACCGCGGTGTCCGGCAGCGCCGGTGGGGCAAGTGGGTGGCCGAGATCCGCGAGCCCAACCGCGGCAAGCGCCACTGGCTGGGCACCTTCGACAATCCCGTCGACGCGGCCGTCGCCTACGACCGGGCGGCCGTGTCCATCCACGGCGCCCACGCGCACCTCAACTTCCCCTGCTCTGCCGCCACCACTGCCGACGCATCCCTCGAGCATGAGGCAAAGCCGATGGTTGCTGCTGCTGCGCTTGGCGGCGGTGGCGCAGAAGCCGTAAGTCAGCGGCAGGAGGACGACGACCCTCATGACATCGCCATGTACATCGATTTCGATGCGGTGTTCGACATGGTGCCCTTTTGTCATGGCATCAAGAGAGAGGATTGCCAGCATGAGGGGTTCGATGGCGACGCCGTTCACTCGCCGCTGTGGGCACTGGGTGACTGAAATGGGTATCTGAGCGAGGCAGGGTGAGATGGCAACTTGGCTGACTTCAGTAGCGTTGTTGTTCTGATGGTT
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